Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC8.59□□□□□ -1.04
PrkdcP97313 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm37133-201ENSMUST00000192705 1922 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm22846-201ENSMUST00000157706 270 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm26368-201ENSMUST00000157826 118 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm11942-201ENSMUST00000180255 345 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm9797-202ENSMUST00000218003 294 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 AC105408.1-201ENSMUST00000227771 802 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm6831-202ENSMUST00000213025 1673 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm4782-201ENSMUST00000168705 2046 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm5700-201ENSMUST00000191483 989 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm36982-201ENSMUST00000193796 1128 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Lgi3-203ENSMUST00000226548 1001 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
PrkdcP97313 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PrkdcP97313 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC8.58□□□□□ -1.04
PrkdcP97313 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm25053-201ENSMUST00000103982 133 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm25922-201ENSMUST00000104281 130 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC8.58□□□□□ -1.04
PrkdcP97313 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Gm24679-201ENSMUST00000158762 111 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm9135-201ENSMUST00000182963 990 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm25053-202ENSMUST00000199731 132 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC8.58□□□□□ -1.04
PrkdcP97313 AC154257.1-202ENSMUST00000224729 843 ntBASIC8.58□□□□□ -1.04
PrkdcP97313 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC8.58□□□□□ -1.04
PrkdcP97313 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PrkdcP97313 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm20694-201ENSMUST00000176943 404 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm2345-201ENSMUST00000193451 589 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PrkdcP97313 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm26513-201ENSMUST00000181802 2489 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm10728-201ENSMUST00000194292 1829 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.57□□□□□ -1.04
PrkdcP97313 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm12407-201ENSMUST00000180219 324 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PrkdcP97313 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm23272-201ENSMUST00000104053 129 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Gm12579-201ENSMUST00000118040 783 ntBASIC8.57□□□□□ -1.04
PrkdcP97313 Defa-ps17-201ENSMUST00000121849 171 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms