Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.64□□□□□ -0.55
SgcbP82349 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.64□□□□□ -0.55
SgcbP82349 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.63□□□□□ -0.55
SgcbP82349 Gm26185-201ENSMUST00000157692 266 ntBASIC11.63□□□□□ -0.55
SgcbP82349 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Gm37497-201ENSMUST00000195830 798 ntBASIC11.63□□□□□ -0.55
SgcbP82349 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.63□□□□□ -0.55
SgcbP82349 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SgcbP82349 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.63□□□□□ -0.55
SgcbP82349 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcbP82349 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Gm2231-201ENSMUST00000125661 612 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Gm4271-201ENSMUST00000174444 973 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Gm29127-201ENSMUST00000188304 517 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Gm45784-201ENSMUST00000188360 142 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SgcbP82349 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Gm10146-201ENSMUST00000072739 309 ntBASIC11.62□□□□□ -0.55
SgcbP82349 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms