Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.97□□□□□ -0.33
Ldb1P70662 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.97□□□□□ -0.33
Ldb1P70662 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.97□□□□□ -0.33
Ldb1P70662 Gm11978-201ENSMUST00000122315 466 ntBASIC12.97□□□□□ -0.33
Ldb1P70662 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.97□□□□□ -0.33
Ldb1P70662 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.97□□□□□ -0.33
Ldb1P70662 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.97□□□□□ -0.33
Ldb1P70662 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.97□□□□□ -0.33
Ldb1P70662 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.97□□□□□ -0.33
Ldb1P70662 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.97□□□□□ -0.33
Ldb1P70662 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ldb1P70662 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ldb1P70662 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ldb1P70662 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ldb1P70662 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.96□□□□□ -0.33
Ldb1P70662 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ldb1P70662 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Gm13612-201ENSMUST00000119276 390 ntBASIC12.96□□□□□ -0.33
Ldb1P70662 Gm12490-201ENSMUST00000120255 560 ntBASIC12.96□□□□□ -0.33
Ldb1P70662 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.96□□□□□ -0.33
Ldb1P70662 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.96□□□□□ -0.33
Ldb1P70662 Gm7287-201ENSMUST00000205267 602 ntBASIC12.96□□□□□ -0.33
Ldb1P70662 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ldb1P70662 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.96□□□□□ -0.33
Ldb1P70662 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ldb1P70662 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Ldb1P70662 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Ldb1P70662 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.96□□□□□ -0.34
Ldb1P70662 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ldb1P70662 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ldb1P70662 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.95□□□□□ -0.34
Ldb1P70662 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ldb1P70662 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ldb1P70662 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ldb1P70662 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Proscos-202ENSMUST00000178990 666 ntBASIC12.95□□□□□ -0.34
Ldb1P70662 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.95□□□□□ -0.34
Ldb1P70662 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.95□□□□□ -0.34
Ldb1P70662 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.95□□□□□ -0.34
Ldb1P70662 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ldb1P70662 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.95□□□□□ -0.34
Ldb1P70662 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms