Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.85□□□□□ -0.35
Shox2P70390 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Shox2P70390 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shox2P70390 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shox2P70390 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shox2P70390 Gm26035-201ENSMUST00000083065 308 ntBASIC12.85□□□□□ -0.35
Shox2P70390 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.85□□□□□ -0.35
Shox2P70390 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Shox2P70390 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Shox2P70390 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.85□□□□□ -0.35
Shox2P70390 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shox2P70390 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shox2P70390 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shox2P70390 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shox2P70390 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shox2P70390 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shox2P70390 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.83□□□□□ -0.35
Shox2P70390 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shox2P70390 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.83□□□□□ -0.35
Shox2P70390 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shox2P70390 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shox2P70390 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.83□□□□□ -0.36
Shox2P70390 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.83□□□□□ -0.36
Shox2P70390 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.83□□□□□ -0.36
Shox2P70390 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.83□□□□□ -0.36
Shox2P70390 Gm44771-201ENSMUST00000206975 626 ntBASIC12.83□□□□□ -0.36
Shox2P70390 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.83□□□□□ -0.36
Shox2P70390 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.83□□□□□ -0.36
Shox2P70390 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.83□□□□□ -0.36
Shox2P70390 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Shox2P70390 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shox2P70390 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms