Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.84□□□□□ -0.51
Lsm3P62311 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm3P62311 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm3P62311 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm3P62311 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Lsm3P62311 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lsm3P62311 Gm27631-201ENSMUST00000184163 466 ntBASIC11.83□□□□□ -0.52
Lsm3P62311 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.83□□□□□ -0.52
Lsm3P62311 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.83□□□□□ -0.52
Lsm3P62311 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lsm3P62311 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Lsm3P62311 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm3P62311 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm3P62311 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm3P62311 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Gm15770-201ENSMUST00000117498 584 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Gm8927-201ENSMUST00000181978 981 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.82□□□□□ -0.52
Lsm3P62311 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Gm3222-201ENSMUST00000071282 990 ntBASIC11.82□□□□□ -0.52
Lsm3P62311 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm3P62311 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms