Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rrp1P56183 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rrp1P56183 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rrp1P56183 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 Gm27838-201ENSMUST00000184829 128 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.68□□□□□ -0.06
Rrp1P56183 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rrp1P56183 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Rrp1P56183 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rrp1P56183 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rrp1P56183 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rrp1P56183 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Gm24694-201ENSMUST00000180054 110 ntBASIC14.67□□□□□ -0.06
Rrp1P56183 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rrp1P56183 Gm27663-201ENSMUST00000184839 110 ntBASIC14.67□□□□□ -0.06
Rrp1P56183 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.67□□□□□ -0.06
Rrp1P56183 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.67□□□□□ -0.06
Rrp1P56183 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.67□□□□□ -0.06
Rrp1P56183 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rrp1P56183 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.67□□□□□ -0.06
Rrp1P56183 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.67□□□□□ -0.06
Rrp1P56183 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.67□□□□□ -0.06
Rrp1P56183 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rrp1P56183 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.66□□□□□ -0.06
Rrp1P56183 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.66□□□□□ -0.06
Rrp1P56183 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rrp1P56183 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Gm22189-201ENSMUST00000103822 86 ntBASIC14.66□□□□□ -0.06
Rrp1P56183 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rrp1P56183 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Rrp1P56183 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms