Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh11P55288 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh11P55288 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdh11P55288 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh11P55288 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.89□□□□□ -0.51
Cdh11P55288 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.89□□□□□ -0.51
Cdh11P55288 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cdh11P55288 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh11P55288 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.89□□□□□ -0.51
Cdh11P55288 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cdh11P55288 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdh11P55288 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.88□□□□□ -0.51
Cdh11P55288 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm43433-201ENSMUST00000196573 481 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm18307-201ENSMUST00000206864 949 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.88□□□□□ -0.51
Cdh11P55288 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdh11P55288 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdh11P55288 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh11P55288 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh11P55288 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cdh11P55288 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Cdh11P55288 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Gm13385-201ENSMUST00000121089 220 ntBASIC11.87□□□□□ -0.51
Cdh11P55288 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cdh11P55288 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
Cdh11P55288 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdh11P55288 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdh11P55288 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh11P55288 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms