Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.63□□□□□ -0.23
NcanP55066 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.63□□□□□ -0.23
NcanP55066 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
NcanP55066 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NcanP55066 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NcanP55066 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Mir181d-201ENSMUST00000102383 72 ntBASIC13.62□□□□□ -0.23
NcanP55066 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NcanP55066 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.62□□□□□ -0.23
NcanP55066 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NcanP55066 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.62□□□□□ -0.23
NcanP55066 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.62□□□□□ -0.23
NcanP55066 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.62□□□□□ -0.23
NcanP55066 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.62□□□□□ -0.23
NcanP55066 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NcanP55066 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.62□□□□□ -0.23
NcanP55066 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.62□□□□□ -0.23
NcanP55066 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.62□□□□□ -0.23
NcanP55066 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NcanP55066 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.61□□□□□ -0.23
NcanP55066 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.61□□□□□ -0.23
NcanP55066 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NcanP55066 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Gm14644-201ENSMUST00000116671 647 ntBASIC13.61□□□□□ -0.23
NcanP55066 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.61□□□□□ -0.23
NcanP55066 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NcanP55066 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.61□□□□□ -0.23
NcanP55066 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.61□□□□□ -0.23
NcanP55066 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.61□□□□□ -0.23
NcanP55066 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.61□□□□□ -0.23
NcanP55066 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.61□□□□□ -0.23
NcanP55066 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
NcanP55066 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NcanP55066 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms