Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.39■□□□□ 0.21
Msh6P54276 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.39■□□□□ 0.21
Msh6P54276 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Msh6P54276 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Gm16296-201ENSMUST00000159905 325 ntBASIC16.38■□□□□ 0.21
Msh6P54276 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.38■□□□□ 0.21
Msh6P54276 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Gm44405-201ENSMUST00000198952 126 ntBASIC16.38■□□□□ 0.21
Msh6P54276 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Grk6-205ENSMUST00000224653 2976 ntBASIC16.38■□□□□ 0.21
Msh6P54276 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Msh6P54276 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Msh6P54276 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Msh6P54276 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.38■□□□□ 0.21
Msh6P54276 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh6P54276 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Msh6P54276 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.37■□□□□ 0.21
Msh6P54276 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Msh6P54276 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Gm23200-201ENSMUST00000104379 132 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Gm9083-201ENSMUST00000120423 819 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.37■□□□□ 0.21
Msh6P54276 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Gm26361-201ENSMUST00000158868 186 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Gm3096-201ENSMUST00000185770 364 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.37■□□□□ 0.21
Msh6P54276 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Msh6P54276 Mir339-201ENSMUST00000083659 96 ntBASIC16.37■□□□□ 0.21
Msh6P54276 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Msh6P54276 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh6P54276 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms