Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cux1P53564 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cux1P53564 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cux1P53564 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cux1P53564 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cux1P53564 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cux1P53564 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC19.68■□□□□ 0.74
Cux1P53564 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Cux1P53564 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC19.68■□□□□ 0.74
Cux1P53564 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC19.68■□□□□ 0.74
Cux1P53564 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 AC159308.2-201ENSMUST00000213592 2325 ntBASIC19.68■□□□□ 0.74
Cux1P53564 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux1P53564 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Cux1P53564 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cux1P53564 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Gm11450-201ENSMUST00000121144 333 ntBASIC19.67■□□□□ 0.74
Cux1P53564 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Gm9996-201ENSMUST00000070359 913 ntBASIC19.67■□□□□ 0.74
Cux1P53564 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Cux1P53564 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.67■□□□□ 0.74
Cux1P53564 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.67■□□□□ 0.74
Cux1P53564 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Gm44891-201ENSMUST00000208817 2223 ntBASIC19.67■□□□□ 0.74
Cux1P53564 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux1P53564 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC19.66■□□□□ 0.74
Cux1P53564 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC19.66■□□□□ 0.74
Cux1P53564 D9Wsu149-201ENSMUST00000214169 594 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm6781-201ENSMUST00000038304 1242 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cux1P53564 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cux1P53564 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.66■□□□□ 0.74
Cux1P53564 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux1P53564 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.66■□□□□ 0.74
Cux1P53564 Gm29615-201ENSMUST00000185371 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28224-201ENSMUST00000186078 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm29001-201ENSMUST00000186177 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28292-201ENSMUST00000186593 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28101-201ENSMUST00000187608 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm29076-201ENSMUST00000187689 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28302-201ENSMUST00000187931 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28646-201ENSMUST00000188220 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28205-201ENSMUST00000189177 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm29032-201ENSMUST00000189797 697 ntBASIC19.66■□□□□ 0.74
Cux1P53564 Gm28695-201ENSMUST00000190300 697 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms