Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LtbrP50284 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LtbrP50284 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LtbrP50284 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.35■□□□□ 0.05
LtbrP50284 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LtbrP50284 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LtbrP50284 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.34■□□□□ 0.05
LtbrP50284 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.34■□□□□ 0.05
LtbrP50284 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm23270-201ENSMUST00000104055 131 ntBASIC15.34■□□□□ 0.05
LtbrP50284 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm11637-201ENSMUST00000120601 592 ntBASIC15.34■□□□□ 0.05
LtbrP50284 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.34■□□□□ 0.05
LtbrP50284 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.34■□□□□ 0.05
LtbrP50284 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm28450-201ENSMUST00000187349 638 ntBASIC15.34■□□□□ 0.05
LtbrP50284 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.34■□□□□ 0.05
LtbrP50284 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 AC154828.2-201ENSMUST00000220908 1070 ntBASIC15.34■□□□□ 0.05
LtbrP50284 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LtbrP50284 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LtbrP50284 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.33■□□□□ 0.05
LtbrP50284 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtbrP50284 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.33■□□□□ 0.05
LtbrP50284 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LtbrP50284 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.33■□□□□ 0.04
LtbrP50284 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.33■□□□□ 0.04
LtbrP50284 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.33■□□□□ 0.04
LtbrP50284 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.33■□□□□ 0.04
LtbrP50284 Gm22993-201ENSMUST00000175423 254 ntBASIC15.33■□□□□ 0.04
LtbrP50284 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.33■□□□□ 0.04
LtbrP50284 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC15.33■□□□□ 0.04
LtbrP50284 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.33■□□□□ 0.04
LtbrP50284 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LtbrP50284 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.33■□□□□ 0.04
LtbrP50284 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LtbrP50284 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.33■□□□□ 0.04
LtbrP50284 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtbrP50284 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.32■□□□□ 0.04
LtbrP50284 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LtbrP50284 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.32■□□□□ 0.04
LtbrP50284 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC15.32■□□□□ 0.04
LtbrP50284 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LtbrP50284 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LtbrP50284 Gm4768-201ENSMUST00000206199 686 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.32■□□□□ 0.04
LtbrP50284 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms