Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm24543-201ENSMUST00000103867 82 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm8410-201ENSMUST00000117225 605 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm6415-201ENSMUST00000118488 348 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm15653-201ENSMUST00000119247 907 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm5779-201ENSMUST00000218467 910 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.8□□□□□ -0.68
Nkx2-1P50220 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm14701-201ENSMUST00000117156 348 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm12428-201ENSMUST00000119844 727 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.79□□□□□ -0.68
Nkx2-1P50220 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-1P50220 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms