Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Srp9P49962 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srp9P49962 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.09□□□□□ -0.63
Srp9P49962 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.09□□□□□ -0.63
Srp9P49962 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srp9P49962 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srp9P49962 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Srp9P49962 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srp9P49962 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.09□□□□□ -0.63
Srp9P49962 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Srp9P49962 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
Srp9P49962 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Srp9P49962 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Srp9P49962 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.08□□□□□ -0.64
Srp9P49962 Gm15240-201ENSMUST00000118156 720 ntBASIC11.08□□□□□ -0.64
Srp9P49962 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Srp9P49962 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Srp9P49962 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.08□□□□□ -0.64
Srp9P49962 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Srp9P49962 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Srp9P49962 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Srp9P49962 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srp9P49962 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.07□□□□□ -0.64
Srp9P49962 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Srp9P49962 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.07□□□□□ -0.64
Srp9P49962 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Srp9P49962 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Gm15487-201ENSMUST00000122373 465 ntBASIC11.07□□□□□ -0.64
Srp9P49962 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.07□□□□□ -0.64
Srp9P49962 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Srp9P49962 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Srp9P49962 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.07□□□□□ -0.64
Srp9P49962 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Srp9P49962 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Srp9P49962 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.07□□□□□ -0.64
Srp9P49962 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.07□□□□□ -0.64
Srp9P49962 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Srp9P49962 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Srp9P49962 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Srp9P49962 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms