Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vps4bP46467 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps4bP46467 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Vps4bP46467 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.24□□□□□ -0.29
Vps4bP46467 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vps4bP46467 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 Gm18062-201ENSMUST00000208020 547 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 Gm18055-201ENSMUST00000208254 547 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps4bP46467 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.24□□□□□ -0.29
Vps4bP46467 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps4bP46467 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps4bP46467 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps4bP46467 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps4bP46467 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.23□□□□□ -0.29
Vps4bP46467 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
Vps4bP46467 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.23□□□□□ -0.29
Vps4bP46467 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Vps4bP46467 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Vps4bP46467 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.23□□□□□ -0.29
Vps4bP46467 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps4bP46467 Gm6218-201ENSMUST00000219812 628 ntBASIC13.23□□□□□ -0.29
Vps4bP46467 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps4bP46467 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps4bP46467 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps4bP46467 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Vps4bP46467 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.22□□□□□ -0.29
Vps4bP46467 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Gm15824-201ENSMUST00000119516 955 ntBASIC13.22□□□□□ -0.29
Vps4bP46467 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.22□□□□□ -0.29
Vps4bP46467 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.22□□□□□ -0.29
Vps4bP46467 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Vps4bP46467 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps4bP46467 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Vps4bP46467 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps4bP46467 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms