Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox18P43680 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox18P43680 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox18P43680 Gm44069-201ENSMUST00000204898 506 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Gm44548-201ENSMUST00000208929 192 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox18P43680 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.59□□□□□ -0.39
Sox18P43680 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.59□□□□□ -0.39
Sox18P43680 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.59□□□□□ -0.39
Sox18P43680 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox18P43680 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Sox18P43680 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox18P43680 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox18P43680 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox18P43680 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Sox18P43680 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Sox18P43680 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 Gm24380-201ENSMUST00000122696 324 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox18P43680 Gm13316-201ENSMUST00000140537 691 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox18P43680 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Gm27438-201ENSMUST00000183480 110 ntBASIC12.58□□□□□ -0.4
Sox18P43680 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Gm5708-201ENSMUST00000196289 886 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Gm4768-201ENSMUST00000206199 686 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox18P43680 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 Gm19212-201ENSMUST00000216642 862 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 AC173345.3-201ENSMUST00000221245 1093 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.58□□□□□ -0.4
Sox18P43680 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.58□□□□□ -0.4
Sox18P43680 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Sox18P43680 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox18P43680 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox18P43680 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Gm16202-201ENSMUST00000117532 544 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Gm14208-201ENSMUST00000119645 678 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Gm12363-201ENSMUST00000122250 668 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms