Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdx2P43241 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdx2P43241 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdx2P43241 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.33□□□□□ -0.43
Cdx2P43241 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdx2P43241 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cdx2P43241 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm25732-201ENSMUST00000175168 60 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm43947-201ENSMUST00000203019 959 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm45925-201ENSMUST00000218882 744 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Cdx2P43241 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.33□□□□□ -0.44
Cdx2P43241 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx2P43241 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdx2P43241 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdx2P43241 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdx2P43241 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdx2P43241 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cdx2P43241 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cdx2P43241 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdx2P43241 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm27023-201ENSMUST00000182372 285 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdx2P43241 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdx2P43241 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdx2P43241 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdx2P43241 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdx2P43241 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cdx2P43241 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.32□□□□□ -0.44
Cdx2P43241 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx2P43241 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdx2P43241 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms