Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC19.07■□□□□ 0.64
Chd1P40201 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chd1P40201 Gm9022-201ENSMUST00000182482 992 ntBASIC19.07■□□□□ 0.64
Chd1P40201 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC19.07■□□□□ 0.64
Chd1P40201 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
Chd1P40201 Gm35713-201ENSMUST00000210516 199 ntBASIC19.07■□□□□ 0.64
Chd1P40201 AC134860.1-201ENSMUST00000224867 660 ntBASIC19.07■□□□□ 0.64
Chd1P40201 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chd1P40201 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Chd1P40201 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC19.07■□□□□ 0.64
Chd1P40201 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chd1P40201 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chd1P40201 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Chd1P40201 Gm25063-201ENSMUST00000104666 94 ntBASIC19.06■□□□□ 0.64
Chd1P40201 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Chd1P40201 Gm18304-201ENSMUST00000189162 546 ntBASIC19.06■□□□□ 0.64
Chd1P40201 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 AC154572.1-201ENSMUST00000226098 1204 ntBASIC19.06■□□□□ 0.64
Chd1P40201 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Chd1P40201 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd1P40201 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd1P40201 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Chd1P40201 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd1P40201 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chd1P40201 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Chd1P40201 Gm11663-201ENSMUST00000117888 290 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Gm12943-201ENSMUST00000119616 210 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Gm25604-201ENSMUST00000158359 133 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC19.05■□□□□ 0.64
Chd1P40201 Gm45500-201ENSMUST00000211676 803 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Gm18968-201ENSMUST00000221319 862 ntBASIC19.05■□□□□ 0.64
Chd1P40201 AC154257.1-202ENSMUST00000224729 843 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.05■□□□□ 0.64
Chd1P40201 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Gm7537-201ENSMUST00000221660 1414 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Gm28386-201ENSMUST00000189147 1849 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Chd1P40201 Gm11979-201ENSMUST00000119629 743 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Gm5340-201ENSMUST00000203733 880 ntBASIC19.05■□□□□ 0.64
Chd1P40201 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chd1P40201 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1P40201 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Chd1P40201 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Gm5419-201ENSMUST00000119301 527 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Gm12164-201ENSMUST00000121695 551 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Chd1P40201 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Gm5714-201ENSMUST00000197343 566 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC19.04■□□□□ 0.64
Chd1P40201 AC112945.1-201ENSMUST00000226413 514 ntBASIC19.04■□□□□ 0.64
Chd1P40201 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd1P40201 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Chd1P40201 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd1P40201 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd1P40201 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Gm14752-201ENSMUST00000120719 2075 ntBASIC19.04■□□□□ 0.64
Chd1P40201 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms