Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LdlrP35951 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LdlrP35951 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LdlrP35951 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LdlrP35951 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm11425-201ENSMUST00000119608 498 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.98□□□□□ -0.33
LdlrP35951 Gm28911-201ENSMUST00000188837 117 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.98□□□□□ -0.33
LdlrP35951 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.98□□□□□ -0.33
LdlrP35951 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm9396-201ENSMUST00000076703 567 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Gm24447-201ENSMUST00000083977 338 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LdlrP35951 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LdlrP35951 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LdlrP35951 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LdlrP35951 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
LdlrP35951 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.98□□□□□ -0.33
LdlrP35951 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.97□□□□□ -0.33
LdlrP35951 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.97□□□□□ -0.33
LdlrP35951 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.97□□□□□ -0.33
LdlrP35951 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LdlrP35951 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
LdlrP35951 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LdlrP35951 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.97□□□□□ -0.33
LdlrP35951 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.97□□□□□ -0.33
LdlrP35951 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LdlrP35951 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LdlrP35951 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.96□□□□□ -0.33
LdlrP35951 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.96□□□□□ -0.33
LdlrP35951 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.96□□□□□ -0.33
LdlrP35951 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LdlrP35951 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.96□□□□□ -0.33
LdlrP35951 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.96□□□□□ -0.33
LdlrP35951 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.96□□□□□ -0.33
LdlrP35951 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.96□□□□□ -0.33
LdlrP35951 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.96□□□□□ -0.33
LdlrP35951 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.96□□□□□ -0.33
LdlrP35951 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.96□□□□□ -0.33
LdlrP35951 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.96□□□□□ -0.33
LdlrP35951 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LdlrP35951 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LdlrP35951 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms