Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc5P32043 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Hoxc5P32043 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxc5P32043 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.09□□□□□ -0.47
Hoxc5P32043 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm6447-201ENSMUST00000118905 835 ntBASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.09□□□□□ -0.47
Hoxc5P32043 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.09□□□□□ -0.47
Hoxc5P32043 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc5P32043 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.09□□□□□ -0.47
Hoxc5P32043 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc5P32043 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc5P32043 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxc5P32043 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxc5P32043 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Hoxc5P32043 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Auts2-212ENSMUST00000178555 309 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm38223-201ENSMUST00000194484 695 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.08□□□□□ -0.48
Hoxc5P32043 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.08□□□□□ -0.48
Hoxc5P32043 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms