Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Gm12585-201ENSMUST00000117307 290 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.47□□□□□ -0.57
Cd28P31041 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cd28P31041 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Gm27533-201ENSMUST00000183800 152 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm7774-201ENSMUST00000200064 533 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.47□□□□□ -0.57
Cd28P31041 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.47□□□□□ -0.57
Cd28P31041 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cd28P31041 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cd28P31041 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.47□□□□□ -0.57
Cd28P31041 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cd28P31041 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.46□□□□□ -0.57
Cd28P31041 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.46□□□□□ -0.57
Cd28P31041 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.46□□□□□ -0.57
Cd28P31041 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.46□□□□□ -0.57
Cd28P31041 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Cd28P31041 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm12403-201ENSMUST00000121384 959 ntBASIC11.46□□□□□ -0.57
Cd28P31041 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.46□□□□□ -0.57
Cd28P31041 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.46□□□□□ -0.57
Cd28P31041 Gm18905-201ENSMUST00000205454 928 ntBASIC11.46□□□□□ -0.57
Cd28P31041 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.46□□□□□ -0.57
Cd28P31041 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cd28P31041 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cd28P31041 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cd28P31041 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Cd28P31041 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cd28P31041 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.46□□□□□ -0.58
Cd28P31041 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.46□□□□□ -0.58
Cd28P31041 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cd28P31041 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cd28P31041 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd28P31041 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.46□□□□□ -0.58
Cd28P31041 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms