Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm17968-201ENSMUST00000194902 784 ntBASIC12□□□□□ -0.49
Nedd8P29595 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12□□□□□ -0.49
Nedd8P29595 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12□□□□□ -0.49
Nedd8P29595 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nedd8P29595 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Nedd8P29595 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Nedd8P29595 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nedd8P29595 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nedd8P29595 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nedd8P29595 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm19931-201ENSMUST00000198920 368 ntBASIC11.99□□□□□ -0.49
Nedd8P29595 Gm34391-201ENSMUST00000203706 907 ntBASIC11.99□□□□□ -0.49
Nedd8P29595 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.99□□□□□ -0.49
Nedd8P29595 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nedd8P29595 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.99□□□□□ -0.49
Nedd8P29595 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nedd8P29595 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.99□□□□□ -0.49
Nedd8P29595 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.98□□□□□ -0.49
Nedd8P29595 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.98□□□□□ -0.49
Nedd8P29595 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm8927-201ENSMUST00000181978 981 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm27631-201ENSMUST00000184163 466 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Birc2-201ENSMUST00000054878 378 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm3222-201ENSMUST00000071282 990 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.98□□□□□ -0.49
Nedd8P29595 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Nedd8P29595 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nedd8P29595 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms