Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.97□□□□□ -0.33
Nckap1P28660 Gm4986-201ENSMUST00000119731 549 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 Gm11978-201ENSMUST00000122315 466 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.97□□□□□ -0.33
Nckap1P28660 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.97□□□□□ -0.33
Nckap1P28660 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nckap1P28660 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nckap1P28660 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Gm3890-201ENSMUST00000182416 207 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 Gm6334-201ENSMUST00000207083 228 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.97□□□□□ -0.33
Nckap1P28660 Cts7-204ENSMUST00000225321 1257 ntBASIC12.97□□□□□ -0.33
Nckap1P28660 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nckap1P28660 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.97□□□□□ -0.33
Nckap1P28660 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.97□□□□□ -0.33
Nckap1P28660 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nckap1P28660 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Acot6-202ENSMUST00000222921 3622 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Nckap1P28660 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nckap1P28660 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.96□□□□□ -0.33
Nckap1P28660 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.96□□□□□ -0.33
Nckap1P28660 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nckap1P28660 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm10434-201ENSMUST00000101158 471 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm13297-201ENSMUST00000120205 934 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm2991-201ENSMUST00000173338 480 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm43758-201ENSMUST00000199500 367 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Gm45865-201ENSMUST00000211815 945 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.96□□□□□ -0.33
Nckap1P28660 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nckap1P28660 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nckap1P28660 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.96□□□□□ -0.33
Nckap1P28660 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Nckap1P28660 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nckap1P28660 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.96□□□□□ -0.34
Nckap1P28660 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nckap1P28660 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.96□□□□□ -0.34
Nckap1P28660 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nckap1P28660 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nckap1P28660 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nckap1P28660 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.96□□□□□ -0.34
Nckap1P28660 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nckap1P28660 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.95□□□□□ -0.34
Nckap1P28660 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.95□□□□□ -0.34
Nckap1P28660 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.95□□□□□ -0.34
Nckap1P28660 Gm14381-201ENSMUST00000122105 414 ntBASIC12.95□□□□□ -0.34
Nckap1P28660 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nckap1P28660 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm27320-201ENSMUST00000184892 109 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms