Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.04□□□□□ -0.48
BgnP28653 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Gm15393-201ENSMUST00000120499 219 ntBASIC12.04□□□□□ -0.48
BgnP28653 Gm13365-201ENSMUST00000121188 973 ntBASIC12.04□□□□□ -0.48
BgnP28653 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BgnP28653 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.04□□□□□ -0.48
BgnP28653 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.04□□□□□ -0.48
BgnP28653 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.04□□□□□ -0.48
BgnP28653 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.04□□□□□ -0.48
BgnP28653 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.04□□□□□ -0.48
BgnP28653 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BgnP28653 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.04□□□□□ -0.48
BgnP28653 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.04□□□□□ -0.48
BgnP28653 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.04□□□□□ -0.48
BgnP28653 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BgnP28653 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.04□□□□□ -0.48
BgnP28653 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BgnP28653 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
BgnP28653 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.03□□□□□ -0.48
BgnP28653 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
BgnP28653 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.03□□□□□ -0.48
BgnP28653 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.03□□□□□ -0.48
BgnP28653 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.03□□□□□ -0.48
BgnP28653 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.03□□□□□ -0.48
BgnP28653 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.03□□□□□ -0.48
BgnP28653 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.03□□□□□ -0.48
BgnP28653 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BgnP28653 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.03□□□□□ -0.48
BgnP28653 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.03□□□□□ -0.48
BgnP28653 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BgnP28653 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BgnP28653 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BgnP28653 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BgnP28653 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
BgnP28653 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.02□□□□□ -0.48
BgnP28653 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
BgnP28653 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
BgnP28653 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BgnP28653 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BgnP28653 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BgnP28653 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms