Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Col2a1P28481 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col2a1P28481 Gm13296-201ENSMUST00000117854 997 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.58□□□□□ -0.08
Col2a1P28481 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.58□□□□□ -0.08
Col2a1P28481 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.58□□□□□ -0.08
Col2a1P28481 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col2a1P28481 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Col2a1P28481 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.58□□□□□ -0.08
Col2a1P28481 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col2a1P28481 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.58□□□□□ -0.08
Col2a1P28481 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col2a1P28481 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Col2a1P28481 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Col2a1P28481 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col2a1P28481 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Gm44651-201ENSMUST00000207343 372 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.57□□□□□ -0.08
Col2a1P28481 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Col2a1P28481 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Col2a1P28481 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Gm4909-201ENSMUST00000118749 794 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Col2a1P28481 Gm18304-201ENSMUST00000189162 546 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Gm37666-201ENSMUST00000194110 866 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 Gm44262-201ENSMUST00000204969 372 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.57□□□□□ -0.08
Col2a1P28481 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.57□□□□□ -0.08
Col2a1P28481 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.57□□□□□ -0.08
Col2a1P28481 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col2a1P28481 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.56□□□□□ -0.08
Col2a1P28481 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms