Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.86□□□□□ -0.51
Cbx3P23198 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cbx3P23198 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Cbx3P23198 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.85□□□□□ -0.51
Cbx3P23198 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Gm16198-201ENSMUST00000118766 670 ntBASIC11.85□□□□□ -0.51
Cbx3P23198 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.85□□□□□ -0.51
Cbx3P23198 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.85□□□□□ -0.51
Cbx3P23198 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.85□□□□□ -0.51
Cbx3P23198 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.85□□□□□ -0.51
Cbx3P23198 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cbx3P23198 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cbx3P23198 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cbx3P23198 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.84□□□□□ -0.51
Cbx3P23198 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.84□□□□□ -0.51
Cbx3P23198 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.84□□□□□ -0.51
Cbx3P23198 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cbx3P23198 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.84□□□□□ -0.51
Cbx3P23198 Gm5177-201ENSMUST00000183092 997 ntBASIC11.84□□□□□ -0.51
Cbx3P23198 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.84□□□□□ -0.51
Cbx3P23198 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.84□□□□□ -0.51
Cbx3P23198 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.84□□□□□ -0.51
Cbx3P23198 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.84□□□□□ -0.51
Cbx3P23198 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cbx3P23198 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.84□□□□□ -0.51
Cbx3P23198 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cbx3P23198 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cbx3P23198 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cbx3P23198 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms