Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
BdnfP21237 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.52□□□□□ -0.4
BdnfP21237 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
BdnfP21237 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BdnfP21237 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
BdnfP21237 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
BdnfP21237 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.52□□□□□ -0.41
BdnfP21237 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.52□□□□□ -0.41
BdnfP21237 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Mir8102-201ENSMUST00000184148 139 ntBASIC12.52□□□□□ -0.41
BdnfP21237 Gm27838-201ENSMUST00000184829 128 ntBASIC12.52□□□□□ -0.41
BdnfP21237 Gm43094-201ENSMUST00000196549 921 ntBASIC12.52□□□□□ -0.41
BdnfP21237 Gm44872-201ENSMUST00000207864 420 ntBASIC12.52□□□□□ -0.41
BdnfP21237 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.52□□□□□ -0.41
BdnfP21237 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Gm9797-201ENSMUST00000052902 613 ntBASIC12.52□□□□□ -0.41
BdnfP21237 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
BdnfP21237 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
BdnfP21237 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.52□□□□□ -0.41
BdnfP21237 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BdnfP21237 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
BdnfP21237 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.51□□□□□ -0.41
BdnfP21237 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.51□□□□□ -0.41
BdnfP21237 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.51□□□□□ -0.41
BdnfP21237 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Matn2-203ENSMUST00000226766 3252 ntBASIC12.51□□□□□ -0.41
BdnfP21237 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
BdnfP21237 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BdnfP21237 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.51□□□□□ -0.41
BdnfP21237 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.51□□□□□ -0.41
BdnfP21237 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
BdnfP21237 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
BdnfP21237 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.51□□□□□ -0.41
BdnfP21237 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
BdnfP21237 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
BdnfP21237 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
BdnfP21237 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.51□□□□□ -0.41
BdnfP21237 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BdnfP21237 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Pck2-205ENSMUST00000226352 2784 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms