Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.57□□□□□ -0.08
Tpm3P21107 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tpm3P21107 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.57□□□□□ -0.08
Tpm3P21107 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tpm3P21107 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tpm3P21107 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.57□□□□□ -0.08
Tpm3P21107 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.57□□□□□ -0.08
Tpm3P21107 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.57□□□□□ -0.08
Tpm3P21107 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tpm3P21107 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.57□□□□□ -0.08
Tpm3P21107 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm3P21107 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tpm3P21107 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Tpm3P21107 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tpm3P21107 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Gm25287-201ENSMUST00000103846 110 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Gm22918-201ENSMUST00000103855 110 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Gm6912-201ENSMUST00000117218 544 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Gm13015-201ENSMUST00000118674 204 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.56□□□□□ -0.08
Tpm3P21107 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.56□□□□□ -0.08
Tpm3P21107 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tpm3P21107 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
Tpm3P21107 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Gm33320-201ENSMUST00000192232 530 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.56□□□□□ -0.08
Tpm3P21107 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tpm3P21107 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm3P21107 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.56□□□□□ -0.08
Tpm3P21107 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tpm3P21107 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Mir1895-201ENSMUST00000122615 79 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.55□□□□□ -0.08
Tpm3P21107 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm27494-201ENSMUST00000184735 189 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Dupd1-202ENSMUST00000224735 548 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms