Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccl3P10855 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccl3P10855 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl3P10855 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl3P10855 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm13736-201ENSMUST00000119272 253 ntBASIC11.46□□□□□ -0.57
Ccl3P10855 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl3P10855 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm25700-201ENSMUST00000177693 110 ntBASIC11.46□□□□□ -0.57
Ccl3P10855 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm37201-201ENSMUST00000191845 523 ntBASIC11.46□□□□□ -0.57
Ccl3P10855 Gm37986-201ENSMUST00000193285 383 ntBASIC11.46□□□□□ -0.57
Ccl3P10855 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccl3P10855 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccl3P10855 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
Ccl3P10855 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl3P10855 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ccl3P10855 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.46□□□□□ -0.58
Ccl3P10855 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ccl3P10855 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.46□□□□□ -0.58
Ccl3P10855 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl3P10855 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.46□□□□□ -0.58
Ccl3P10855 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ccl3P10855 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccl3P10855 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccl3P10855 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.45□□□□□ -0.58
Ccl3P10855 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Ccl3P10855 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.45□□□□□ -0.58
Ccl3P10855 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccl3P10855 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.45□□□□□ -0.58
Ccl3P10855 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccl3P10855 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 474.9 ms