Protein–RNA interactions for Protein: P0DOY1

Dnmt3c, DNA (cytosine-5)-methyltransferase 3C, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3cP0DOY1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dnmt3cP0DOY1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Dnmt3cP0DOY1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Dnmt3cP0DOY1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dnmt3cP0DOY1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm27839-201ENSMUST00000184242 106 ntBASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm19931-201ENSMUST00000198920 368 ntBASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.02□□□□□ -0.33
Dnmt3cP0DOY1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Proscos-202ENSMUST00000178990 666 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm24196-201ENSMUST00000179161 110 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dnmt3cP0DOY1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Dnmt3cP0DOY1 Gm14350-201ENSMUST00000116642 640 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms