Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm45784-201ENSMUST00000188360 142 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm20239-201ENSMUST00000196610 982 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm43818-201ENSMUST00000200605 466 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.97□□□□□ -0.65
Ly6c1P0CW02 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Mir874-201ENSMUST00000104769 76 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm14660-201ENSMUST00000119809 575 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm28693-202ENSMUST00000190758 331 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm44548-201ENSMUST00000208929 192 ntBASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.96□□□□□ -0.65
Ly6c1P0CW02 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms