Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Gm8385-201ENSMUST00000058999 643 ntBASIC16.77■□□□□ 0.28
Hoxc9P09633 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.77■□□□□ 0.27
Hoxc9P09633 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Hoxc9P09633 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hoxc9P09633 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hoxc9P09633 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Gm27023-201ENSMUST00000182372 285 ntBASIC16.76■□□□□ 0.27
Hoxc9P09633 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Gm28450-201ENSMUST00000187349 638 ntBASIC16.76■□□□□ 0.27
Hoxc9P09633 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Hoxc9P09633 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.76■□□□□ 0.27
Hoxc9P09633 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hoxc9P09633 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Hoxc9P09633 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm13315-201ENSMUST00000120376 991 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm13813-201ENSMUST00000120998 787 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm7003-201ENSMUST00000195089 312 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm44651-201ENSMUST00000207343 372 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Gm10312-201ENSMUST00000078515 489 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hoxc9P09633 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.75■□□□□ 0.27
Hoxc9P09633 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc9P09633 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms