Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Gm42928-201ENSMUST00000197338 3339 ntBASIC19.3■□□□□ 0.68
NclP09405 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC19.3■□□□□ 0.68
NclP09405 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NclP09405 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NclP09405 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.3■□□□□ 0.68
NclP09405 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Gm7584-201ENSMUST00000175829 940 ntBASIC19.3■□□□□ 0.68
NclP09405 Gm38341-201ENSMUST00000195357 515 ntBASIC19.3■□□□□ 0.68
NclP09405 Gm6334-201ENSMUST00000207083 228 ntBASIC19.3■□□□□ 0.68
NclP09405 Gm32025-201ENSMUST00000217960 307 ntBASIC19.3■□□□□ 0.68
NclP09405 AC069562.3-201ENSMUST00000225387 587 ntBASIC19.3■□□□□ 0.68
NclP09405 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NclP09405 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NclP09405 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Gm43570-201ENSMUST00000199951 3688 ntBASIC19.3■□□□□ 0.68
NclP09405 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NclP09405 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NclP09405 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.29■□□□□ 0.68
NclP09405 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.29■□□□□ 0.68
NclP09405 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC19.29■□□□□ 0.68
NclP09405 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NclP09405 Gm22121-201ENSMUST00000175148 54 ntBASIC19.29■□□□□ 0.68
NclP09405 Gm19931-201ENSMUST00000198920 368 ntBASIC19.29■□□□□ 0.68
NclP09405 Ighv8-10-201ENSMUST00000199579 358 ntBASIC19.29■□□□□ 0.68
NclP09405 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC19.29■□□□□ 0.68
NclP09405 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.29■□□□□ 0.68
NclP09405 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NclP09405 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NclP09405 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NclP09405 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC19.29■□□□□ 0.68
NclP09405 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NclP09405 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NclP09405 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
NclP09405 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NclP09405 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC19.28■□□□□ 0.68
NclP09405 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NclP09405 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC19.28■□□□□ 0.68
NclP09405 Gm8738-201ENSMUST00000172606 329 ntBASIC19.28■□□□□ 0.68
NclP09405 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC19.28■□□□□ 0.68
NclP09405 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 AC154595.3-201ENSMUST00000224579 384 ntBASIC19.28■□□□□ 0.68
NclP09405 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NclP09405 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NclP09405 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
NclP09405 Gm38157-201ENSMUST00000194178 1698 ntBASIC19.27■□□□□ 0.68
NclP09405 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Ntrk2-209ENSMUST00000225950 2640 ntBASIC19.27■□□□□ 0.68
NclP09405 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NclP09405 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NclP09405 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NclP09405 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NclP09405 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Gm4986-201ENSMUST00000119731 549 ntBASIC19.27■□□□□ 0.68
NclP09405 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC19.27■□□□□ 0.68
NclP09405 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC19.27■□□□□ 0.68
NclP09405 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NclP09405 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms