Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.8□□□□□ -0.2
TnfP06804 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
TnfP06804 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Gm13297-201ENSMUST00000120205 934 ntBASIC13.8□□□□□ -0.2
TnfP06804 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.8□□□□□ -0.2
TnfP06804 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TnfP06804 Gm37489-201ENSMUST00000191883 159 ntBASIC13.8□□□□□ -0.2
TnfP06804 Gm44364-201ENSMUST00000198368 141 ntBASIC13.8□□□□□ -0.2
TnfP06804 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
TnfP06804 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
TnfP06804 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TnfP06804 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
TnfP06804 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.79□□□□□ -0.2
TnfP06804 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Matn2-206ENSMUST00000228570 2798 ntBASIC13.79□□□□□ -0.2
TnfP06804 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.79□□□□□ -0.2
TnfP06804 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.79□□□□□ -0.2
TnfP06804 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.79□□□□□ -0.2
TnfP06804 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.79□□□□□ -0.2
TnfP06804 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.79□□□□□ -0.2
TnfP06804 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.79□□□□□ -0.2
TnfP06804 Gm23363-201ENSMUST00000175024 79 ntBASIC13.79□□□□□ -0.2
TnfP06804 Gm7783-201ENSMUST00000204795 781 ntBASIC13.79□□□□□ -0.2
TnfP06804 Gm45865-201ENSMUST00000211815 945 ntBASIC13.79□□□□□ -0.2
TnfP06804 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.79□□□□□ -0.2
TnfP06804 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.79□□□□□ -0.2
TnfP06804 Gm7046-201ENSMUST00000221351 977 ntBASIC13.79□□□□□ -0.2
TnfP06804 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
TnfP06804 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.79□□□□□ -0.2
TnfP06804 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TnfP06804 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.78□□□□□ -0.2
TnfP06804 Gm4986-201ENSMUST00000119731 549 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms