Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.62□□□□□ -0.55
P06344 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.62□□□□□ -0.55
P06344 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.62□□□□□ -0.55
P06344 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
P06344 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
P06344 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
P06344 Gm11978-201ENSMUST00000122315 466 ntBASIC11.62□□□□□ -0.55
P06344 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.62□□□□□ -0.55
P06344 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.62□□□□□ -0.55
P06344 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.62□□□□□ -0.55
P06344 Gm7029-201ENSMUST00000173226 450 ntBASIC11.62□□□□□ -0.55
P06344 Gm5370-201ENSMUST00000187187 574 ntBASIC11.62□□□□□ -0.55
P06344 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
P06344 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.62□□□□□ -0.55
P06344 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.62□□□□□ -0.55
P06344 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.62□□□□□ -0.55
P06344 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.62□□□□□ -0.55
P06344 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.62□□□□□ -0.55
P06344 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
P06344 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P06344 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.61□□□□□ -0.55
P06344 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.61□□□□□ -0.55
P06344 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.61□□□□□ -0.55
P06344 Gm8805-201ENSMUST00000117848 313 ntBASIC11.61□□□□□ -0.55
P06344 Gm26927-201ENSMUST00000182385 965 ntBASIC11.61□□□□□ -0.55
P06344 Gm27514-201ENSMUST00000183692 110 ntBASIC11.61□□□□□ -0.55
P06344 Gm28693-202ENSMUST00000190758 331 ntBASIC11.61□□□□□ -0.55
P06344 Gm43630-201ENSMUST00000201550 776 ntBASIC11.61□□□□□ -0.55
P06344 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
P06344 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.61□□□□□ -0.55
P06344 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
P06344 Gm9899-201ENSMUST00000065519 555 ntBASIC11.61□□□□□ -0.55
P06344 Gm10268-201ENSMUST00000085340 555 ntBASIC11.61□□□□□ -0.55
P06344 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.61□□□□□ -0.55
P06344 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
P06344 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
P06344 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.61□□□□□ -0.55
P06344 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P06344 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
P06344 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P06344 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.6□□□□□ -0.55
P06344 Gm16479-201ENSMUST00000121706 932 ntBASIC11.6□□□□□ -0.55
P06344 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.6□□□□□ -0.55
P06344 Gm2231-201ENSMUST00000125661 612 ntBASIC11.6□□□□□ -0.55
P06344 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms