Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04940 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04940 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.56□□□□□ -0.72
P04940 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04940 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04940 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04940 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.56□□□□□ -0.72
P04940 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04940 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P04940 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.55□□□□□ -0.72
P04940 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.55□□□□□ -0.72
P04940 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
P04940 Gm8805-201ENSMUST00000117848 313 ntBASIC10.55□□□□□ -0.72
P04940 Gm14921-201ENSMUST00000118643 908 ntBASIC10.55□□□□□ -0.72
P04940 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.55□□□□□ -0.72
P04940 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.55□□□□□ -0.72
P04940 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gm8652-201ENSMUST00000181363 964 ntBASIC10.55□□□□□ -0.72
P04940 Gm27486-201ENSMUST00000184923 80 ntBASIC10.55□□□□□ -0.72
P04940 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.55□□□□□ -0.72
P04940 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.55□□□□□ -0.72
P04940 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.55□□□□□ -0.72
P04940 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.55□□□□□ -0.72
P04940 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
P04940 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.55□□□□□ -0.72
P04940 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.55□□□□□ -0.72
P04940 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.55□□□□□ -0.72
P04940 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P04940 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.55□□□□□ -0.72
P04940 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P04940 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.55□□□□□ -0.72
P04940 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04940 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04940 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.54□□□□□ -0.72
P04940 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.54□□□□□ -0.72
P04940 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
P04940 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04940 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
P04940 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04940 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.54□□□□□ -0.72
P04940 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.54□□□□□ -0.72
P04940 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.54□□□□□ -0.72
P04940 Gm16479-201ENSMUST00000121706 932 ntBASIC10.54□□□□□ -0.72
P04940 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.54□□□□□ -0.72
P04940 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
P04940 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.54□□□□□ -0.72
P04940 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.54□□□□□ -0.72
P04940 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.54□□□□□ -0.72
P04940 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.54□□□□□ -0.72
P04940 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.54□□□□□ -0.72
P04940 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
P04940 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.54□□□□□ -0.72
P04940 Gm5035-201ENSMUST00000215581 927 ntBASIC10.54□□□□□ -0.72
P04940 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.54□□□□□ -0.72
P04940 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.54□□□□□ -0.72
P04940 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.54□□□□□ -0.72
P04940 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04940 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms