Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.45□□□□□ -0.26
PrnpP04925 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
PrnpP04925 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PrnpP04925 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PrnpP04925 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PrnpP04925 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrnpP04925 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PrnpP04925 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PrnpP04925 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
PrnpP04925 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.44□□□□□ -0.26
PrnpP04925 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.44□□□□□ -0.26
PrnpP04925 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PrnpP04925 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.44□□□□□ -0.26
PrnpP04925 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.44□□□□□ -0.26
PrnpP04925 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PrnpP04925 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.44□□□□□ -0.26
PrnpP04925 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.44□□□□□ -0.26
PrnpP04925 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.44□□□□□ -0.26
PrnpP04925 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PrnpP04925 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PrnpP04925 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.43□□□□□ -0.26
PrnpP04925 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.43□□□□□ -0.26
PrnpP04925 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PrnpP04925 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Gm13736-201ENSMUST00000119272 253 ntBASIC13.43□□□□□ -0.26
PrnpP04925 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PrnpP04925 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.43□□□□□ -0.26
PrnpP04925 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.43□□□□□ -0.26
PrnpP04925 Gm8712-201ENSMUST00000221090 701 ntBASIC13.43□□□□□ -0.26
PrnpP04925 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.43□□□□□ -0.26
PrnpP04925 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.43□□□□□ -0.26
PrnpP04925 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PrnpP04925 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms