Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Vti1aO89116 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1aO89116 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1aO89116 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vti1aO89116 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Vti1aO89116 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Gm12241-201ENSMUST00000118330 726 ntBASIC14.05□□□□□ -0.16
Vti1aO89116 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.05□□□□□ -0.16
Vti1aO89116 Gm25261-201ENSMUST00000157416 134 ntBASIC14.05□□□□□ -0.16
Vti1aO89116 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Gm43118-201ENSMUST00000199149 775 ntBASIC14.05□□□□□ -0.16
Vti1aO89116 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.05□□□□□ -0.16
Vti1aO89116 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.05□□□□□ -0.16
Vti1aO89116 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1aO89116 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.05□□□□□ -0.16
Vti1aO89116 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1aO89116 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Vti1aO89116 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vti1aO89116 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vti1aO89116 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vti1aO89116 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vti1aO89116 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vti1aO89116 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.04□□□□□ -0.16
Vti1aO89116 Gm2231-201ENSMUST00000125661 612 ntBASIC14.04□□□□□ -0.16
Vti1aO89116 Gm16379-201ENSMUST00000161469 348 ntBASIC14.04□□□□□ -0.16
Vti1aO89116 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.04□□□□□ -0.16
Vti1aO89116 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.04□□□□□ -0.16
Vti1aO89116 Gm8762-201ENSMUST00000193486 339 ntBASIC14.04□□□□□ -0.16
Vti1aO89116 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vti1aO89116 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.04□□□□□ -0.16
Vti1aO89116 Gm6334-201ENSMUST00000207083 228 ntBASIC14.04□□□□□ -0.16
Vti1aO89116 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.04□□□□□ -0.16
Vti1aO89116 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1aO89116 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms