Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClppO88696 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.78□□□□□ -0.36
ClppO88696 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Gm11803-201ENSMUST00000119966 444 ntBASIC12.78□□□□□ -0.36
ClppO88696 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.78□□□□□ -0.36
ClppO88696 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.78□□□□□ -0.36
ClppO88696 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.78□□□□□ -0.36
ClppO88696 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
ClppO88696 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
ClppO88696 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClppO88696 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ClppO88696 Gm13392-201ENSMUST00000117708 150 ntBASIC12.77□□□□□ -0.37
ClppO88696 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.77□□□□□ -0.37
ClppO88696 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.77□□□□□ -0.37
ClppO88696 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.77□□□□□ -0.37
ClppO88696 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.77□□□□□ -0.37
ClppO88696 Gm6007-201ENSMUST00000208170 823 ntBASIC12.77□□□□□ -0.37
ClppO88696 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.77□□□□□ -0.37
ClppO88696 Gm8598-201ENSMUST00000221184 836 ntBASIC12.77□□□□□ -0.37
ClppO88696 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.77□□□□□ -0.37
ClppO88696 Gm26315-201ENSMUST00000083890 321 ntBASIC12.77□□□□□ -0.37
ClppO88696 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.77□□□□□ -0.37
ClppO88696 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ClppO88696 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClppO88696 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
ClppO88696 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.76□□□□□ -0.37
ClppO88696 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Gm8062-201ENSMUST00000139696 444 ntBASIC12.76□□□□□ -0.37
ClppO88696 Proscos-202ENSMUST00000178990 666 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms