Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.03□□□□□ -0.48
Cops4O88544 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm14767-201ENSMUST00000121559 586 ntBASIC12.03□□□□□ -0.48
Cops4O88544 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.03□□□□□ -0.48
Cops4O88544 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.03□□□□□ -0.48
Cops4O88544 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm4804-201ENSMUST00000182234 999 ntBASIC12.03□□□□□ -0.48
Cops4O88544 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cops4O88544 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cops4O88544 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.03□□□□□ -0.48
Cops4O88544 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cops4O88544 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Cops4O88544 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Cops4O88544 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cops4O88544 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.03□□□□□ -0.48
Cops4O88544 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cops4O88544 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops4O88544 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.02□□□□□ -0.49
Cops4O88544 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.02□□□□□ -0.49
Cops4O88544 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cops4O88544 Gm3436-201ENSMUST00000179930 840 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Gm17837-201ENSMUST00000186435 985 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.02□□□□□ -0.49
Cops4O88544 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Gm5425-201ENSMUST00000214125 459 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Gm6888-201ENSMUST00000221983 706 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.02□□□□□ -0.49
Cops4O88544 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cops4O88544 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cops4O88544 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops4O88544 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cops4O88544 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Cops4O88544 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Cops4O88544 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms