Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.14□□□□□ -0.31
Chrna4O70174 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chrna4O70174 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chrna4O70174 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.14□□□□□ -0.31
Chrna4O70174 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chrna4O70174 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.13□□□□□ -0.31
Chrna4O70174 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Chrna4O70174 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.13□□□□□ -0.31
Chrna4O70174 Gm27486-201ENSMUST00000184923 80 ntBASIC13.13□□□□□ -0.31
Chrna4O70174 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.13□□□□□ -0.31
Chrna4O70174 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Chrna4O70174 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna4O70174 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna4O70174 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.13□□□□□ -0.31
Chrna4O70174 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Chrna4O70174 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.12□□□□□ -0.31
Chrna4O70174 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Chrna4O70174 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chrna4O70174 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.12□□□□□ -0.31
Chrna4O70174 Gm22331-201ENSMUST00000158066 136 ntBASIC13.12□□□□□ -0.31
Chrna4O70174 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.12□□□□□ -0.31
Chrna4O70174 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.12□□□□□ -0.31
Chrna4O70174 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Chrna4O70174 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Chrna4O70174 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna4O70174 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.12□□□□□ -0.31
Chrna4O70174 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna4O70174 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.11□□□□□ -0.31
Chrna4O70174 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna4O70174 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna4O70174 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chrna4O70174 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms