Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.27□□□□□ -0.77
Pde6dO55057 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.27□□□□□ -0.77
Pde6dO55057 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Pde6dO55057 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Pde6dO55057 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pde6dO55057 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pde6dO55057 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.26□□□□□ -0.77
Pde6dO55057 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm13385-201ENSMUST00000121089 220 ntBASIC10.26□□□□□ -0.77
Pde6dO55057 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.26□□□□□ -0.77
Pde6dO55057 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.26□□□□□ -0.77
Pde6dO55057 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.26□□□□□ -0.77
Pde6dO55057 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.26□□□□□ -0.77
Pde6dO55057 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.26□□□□□ -0.77
Pde6dO55057 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pde6dO55057 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pde6dO55057 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Pde6dO55057 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pde6dO55057 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.25□□□□□ -0.77
Pde6dO55057 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.25□□□□□ -0.77
Pde6dO55057 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.25□□□□□ -0.77
Pde6dO55057 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.25□□□□□ -0.77
Pde6dO55057 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.25□□□□□ -0.77
Pde6dO55057 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.25□□□□□ -0.77
Pde6dO55057 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Pde6dO55057 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.25□□□□□ -0.77
Pde6dO55057 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms