Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm7857-201ENSMUST00000117957 358 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 B9d1os-201ENSMUST00000137010 674 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.3□□□□□ -0.12
Trdmt1O55055 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Mir6979-201ENSMUST00000183927 56 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm19208-201ENSMUST00000213861 912 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.3□□□□□ -0.12
Trdmt1O55055 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.3□□□□□ -0.12
Trdmt1O55055 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trdmt1O55055 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdmt1O55055 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Gm12217-201ENSMUST00000118858 696 ntBASIC14.29□□□□□ -0.12
Trdmt1O55055 Gm14208-201ENSMUST00000119645 678 ntBASIC14.29□□□□□ -0.12
Trdmt1O55055 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Gm37201-201ENSMUST00000191845 523 ntBASIC14.29□□□□□ -0.12
Trdmt1O55055 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Mir339-201ENSMUST00000083659 96 ntBASIC14.29□□□□□ -0.12
Trdmt1O55055 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.29□□□□□ -0.12
Trdmt1O55055 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trdmt1O55055 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdmt1O55055 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm25700-201ENSMUST00000177693 110 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm44262-201ENSMUST00000204969 372 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trdmt1O55055 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.28□□□□□ -0.12
Trdmt1O55055 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdmt1O55055 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms