Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Limk2O54785 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.22□□□□□ -0.29
Limk2O54785 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Limk2O54785 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 Gm37497-201ENSMUST00000195830 798 ntBASIC13.21□□□□□ -0.29
Limk2O54785 Gm3961-201ENSMUST00000204425 994 ntBASIC13.21□□□□□ -0.29
Limk2O54785 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.21□□□□□ -0.29
Limk2O54785 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Limk2O54785 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.21□□□□□ -0.29
Limk2O54785 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Limk2O54785 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Limk2O54785 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Mir686-201ENSMUST00000102174 109 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Gm1335-201ENSMUST00000121653 386 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gm4271-201ENSMUST00000174444 973 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gm38266-201ENSMUST00000194931 421 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.2□□□□□ -0.3
Limk2O54785 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.2□□□□□ -0.3
Limk2O54785 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Limk2O54785 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms