Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ppef1O35655 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm11578-201ENSMUST00000118530 459 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm8723-201ENSMUST00000166076 820 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Gm8701-201ENSMUST00000169259 874 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.09■□□□□ 0.01
Ppef1O35655 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.09■□□□□ 0.01
Ppef1O35655 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15.09■□□□□ 0.01
Ppef1O35655 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm23680-201ENSMUST00000083162 164 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ppef1O35655 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ppef1O35655 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Gm38344-201ENSMUST00000195306 1353 ntBASIC15.09■□□□□ 0.01
Ppef1O35655 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppef1O35655 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ppef1O35655 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ppef1O35655 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ppef1O35655 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ppef1O35655 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ppef1O35655 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ppef1O35655 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.08■□□□□ 0
Ppef1O35655 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.08■□□□□ 0
Ppef1O35655 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.08■□□□□ 0
Ppef1O35655 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC15.08■□□□□ 0
Ppef1O35655 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppef1O35655 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppef1O35655 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.08■□□□□ 0
Ppef1O35655 Gm18801-201ENSMUST00000186616 536 ntBASIC15.08■□□□□ 0
Ppef1O35655 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppef1O35655 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.08■□□□□ 0
Ppef1O35655 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.08■□□□□ 0
Ppef1O35655 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppef1O35655 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppef1O35655 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ppef1O35655 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.08■□□□□ 0
Ppef1O35655 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ppef1O35655 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ppef1O35655 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ppef1O35655 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ppef1O35655 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ppef1O35655 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Defa-ps17-201ENSMUST00000121849 171 ntBASIC15.07■□□□□ 0
Ppef1O35655 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC15.07■□□□□ 0
Ppef1O35655 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.07■□□□□ 0
Ppef1O35655 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC15.07■□□□□ 0
Ppef1O35655 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppef1O35655 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms