Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc1a6O35544 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc1a6O35544 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Slc1a6O35544 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc1a6O35544 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc1a6O35544 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.83□□□□□ -0.35
Slc1a6O35544 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Gm6447-201ENSMUST00000118905 835 ntBASIC12.83□□□□□ -0.36
Slc1a6O35544 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Gm2756-201ENSMUST00000195851 400 ntBASIC12.83□□□□□ -0.36
Slc1a6O35544 Gm19078-201ENSMUST00000206311 727 ntBASIC12.83□□□□□ -0.36
Slc1a6O35544 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.83□□□□□ -0.36
Slc1a6O35544 Gm9063-201ENSMUST00000223299 582 ntBASIC12.83□□□□□ -0.36
Slc1a6O35544 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc1a6O35544 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slc1a6O35544 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.82□□□□□ -0.36
Slc1a6O35544 Gm11524-201ENSMUST00000119349 807 ntBASIC12.82□□□□□ -0.36
Slc1a6O35544 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.82□□□□□ -0.36
Slc1a6O35544 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.82□□□□□ -0.36
Slc1a6O35544 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc1a6O35544 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Slc1a6O35544 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Slc1a6O35544 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc1a6O35544 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms