Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc180J3QNE4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Gm11941-201ENSMUST00000119904 610 ntBASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Gm28882-201ENSMUST00000185504 314 ntBASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Gm42937-201ENSMUST00000197360 752 ntBASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc180J3QNE4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc180J3QNE4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Gm10051-201ENSMUST00000145209 414 ntBASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Gm44100-201ENSMUST00000204329 436 ntBASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC23.33■■□□□ 1.33
Ccdc180J3QNE4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Ccdc180J3QNE4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ccdc180J3QNE4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC23.33■■□□□ 1.32
Ccdc180J3QNE4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC23.33■■□□□ 1.32
Ccdc180J3QNE4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm5070-201ENSMUST00000177599 862 ntBASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm5523-201ENSMUST00000180415 997 ntBASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm9230-201ENSMUST00000188228 532 ntBASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm37835-201ENSMUST00000193305 361 ntBASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm5051-201ENSMUST00000204085 485 ntBASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc180J3QNE4 Gm38058-201ENSMUST00000194323 4368 ntBASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms