Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Retreg1-206ENSMUST00000228306 1430 ntBASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Gm42840-201ENSMUST00000200303 2251 ntBASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Gm27530-201ENSMUST00000184096 98 ntBASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcf11G3X9Z4 Gm12286-201ENSMUST00000119246 1002 ntBASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Gm24231-201ENSMUST00000104315 133 ntBASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Gm11331-201ENSMUST00000119764 288 ntBASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Dhrs4-202ENSMUST00000226168 828 ntBASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Gm14267-206ENSMUST00000226870 1209 ntBASIC19.36■□□□□ 0.69
Pcf11G3X9Z4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Gm45706-201ENSMUST00000213063 2136 ntBASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 AC154305.4-201ENSMUST00000224520 614 ntBASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcf11G3X9Z4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Gm14644-201ENSMUST00000116671 647 ntBASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Gm9230-201ENSMUST00000188228 532 ntBASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcf11G3X9Z4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Gm18730-201ENSMUST00000218038 343 ntBASIC19.33■□□□□ 0.69
Pcf11G3X9Z4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms