Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm12266-201ENSMUST00000120311 962 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm17040-202ENSMUST00000170597 889 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm27552-201ENSMUST00000183351 62 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Gm27844-201ENSMUST00000183613 62 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NpcdF8VQB8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.65■□□□□ 0.1
NpcdF8VQB8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.64■□□□□ 0.09
NpcdF8VQB8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.64■□□□□ 0.09
NpcdF8VQB8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Snord83b-201ENSMUST00000104546 94 ntBASIC15.64■□□□□ 0.09
NpcdF8VQB8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.64■□□□□ 0.09
NpcdF8VQB8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.64■□□□□ 0.09
NpcdF8VQB8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.64■□□□□ 0.09
NpcdF8VQB8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm8584-201ENSMUST00000171982 758 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.63■□□□□ 0.09
NpcdF8VQB8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms