Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm25053-202ENSMUST00000199731 132 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm18776-201ENSMUST00000188833 654 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm22763-201ENSMUST00000158374 107 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm2445-201ENSMUST00000182798 989 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm3551-201ENSMUST00000190750 664 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm2474-201ENSMUST00000195162 559 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm16459-201ENSMUST00000121443 686 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm13351-201ENSMUST00000118087 414 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm15707-201ENSMUST00000118804 996 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm13204-201ENSMUST00000120110 821 ntBASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a3E9PWQ3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm25766-201ENSMUST00000104101 131 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm14993-201ENSMUST00000121180 164 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms