Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm25287-201ENSMUST00000103846 110 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm22918-201ENSMUST00000103855 110 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm10766-202ENSMUST00000194123 606 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm5425-201ENSMUST00000214125 459 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Gm12887B1AVM1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm18733-201ENSMUST00000173950 856 ntBASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm17330-201ENSMUST00000221047 165 ntBASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.51□□□□□ -0.73
Gm12887B1AVM1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm12887B1AVM1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms